Personal profile
Research interests
Evolution of metabolic phenotypes in variable tumor microenvironment
The central aim of my lab research is to use ecological-evolutionary principles to understand molecular mechanism of breast and ovarian cancer initiation, progression, and metastasis through adaptation to microenvironment. I hypothesize that evolution of new metabolic phenotypes under variable microenvironment selection can drive cancer through metabolic reprogramming linked to epigenetics and transcription factors activation and stabilization.
We study how the tumor adaptation can shape the new microenvironment and metabolism that shape emerging selective pressures. This interplay between tumor cells and microenvironment plays a fundamental role in development of ever-changing tumor ecosystem leading to more genotypic heterogeneity and phenotypic plasticity. We use integration of single cell genome, epigenome, transcriptome, proteome and metabolome, and pathomics analysis to capture the heterogeneity and plasticity of cancer cells in their natural context.
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Collaborations and top research areas from the last five years
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Modeling the Role and Regulation of Active Stroma in Breast Ductal Carcinoma Microinvasions
Damaghi, M. (PI)
09/1/22 → 08/31/26
Project: Research
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Radiomics and Pathomics to Predict Upstaging of DCIS
Damaghi, M. (PI)
12/8/21 → 04/30/26
Project: Research
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Ecology and Evolution of Breast Carcinogenesis (Year 4)
Damaghi, M. (PI)
09/1/23 → 08/31/24
Project: Research
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Institutional Research Grant 2022
Frohman, M. (PI), Andrzejczyk, A. (CoI), Damaghi, M. (CoI), Guillaume, A. (CoI), Houghton, J. (CoI), Lee, C. (CoI), Liu, S. (CoI), Luberto, C. (CoI), Malik, S. (CoI), Mani, K. (CoI), Prasanna, P. (CoI), Rahme, G. (CoI), Scarbrough, K. (CoI), Stopeck, A. (CoI), Velazquez, F. N. (CoI), Vorkas, C. (CoI), Wan, L. (CoI), Bandovic, J. (CoI), Li, E. (CoI), Orfanelli, T. (CoI), Qiu, Y. (CoI), Thakur, C. (CoI) & Rageul, J. (CoI)
01/1/22 → 12/31/25
Project: Research
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Eco-Evolutionary Guided Pathomic Analysis Detects Biomarkers to Predict Ductal Carcinoma In Situ Upstaging
Xiao, Y., Elmasry, M., Bai, J. D., Chen, A., Chen, Y., Jackson, B., Johnson, J. O., Prasanna, P., Chen, C. & Damaghi, M., Jul 1 2025, In: Cancer Research. 85, 13, p. 2537-2547 11 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Genome-level selection in tumors as a universal marker of resistance to therapy
Persi, E., Sudalagunta, P. R., Wolf, Y. I., Canevarolo, R. R., Damaghi, M., Shain, K. H., Silva, A. S. & Koonin, E. V., Dec 2025, In: Nature Communications. 16, 1, 6535.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Evolvability of cancer-associated genes under APOBEC3A/B selection
Song, J. H., Dávalos, L. M., MacCarthy, T. & Damaghi, M., Apr 19 2024, In: iScience. 27, 4, 109433.Research output: Contribution to journal › Article › peer-review
Open Access -
Metabolic adaptation and epigenetic modulations: Unraveling tumor plasticity under variable tumor microenvironment
Obeid, J. & Damaghi, M., Jan 1 2024, Cancer Epigenetics and Nanomedicine: Targeting the Right Player via Nanotechnology. Elsevier, p. 169-197 29 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
2 Scopus citations -
To modulate or to skip: De-escalating PARP inhibitor maintenance therapy in ovarian cancer using adaptive therapy
Strobl, M. A. R., Martin, A. L., West, J., Gallaher, J., Robertson-Tessi, M., Gatenby, R., Wenham, R., Maini, P. K., Damaghi, M. & Anderson, A. R. A., Jun 19 2024, In: Cell Systems. 15, 6, p. 510-525.e6Research output: Contribution to journal › Article › peer-review
Open Access12 Scopus citations