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Cell segmentation using stable extremal regions in multi-exposure microscopy images

  • Missouri University of Science and Technology

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

1 Scopus citations

Abstract

We propose a novel cell segmentation approach by extracting Multi-exposure Maximally Stable Extremal Regions (MMSER) in phase contrast microscopy images on the same cell dish. Using our method, cell regions can be well identified by considering the maximally stable regions with response to different camera exposure times. Meanwhile, halo artifacts with regard to cells at different stages are leveraged to identify cells' stages. The experimental results validate that high quality cell segmentation and cell stage classification can be achieved by our approach.

Original languageEnglish
Title of host publication2016 IEEE International Symposium on Biomedical Imaging
Subtitle of host publicationFrom Nano to Macro, ISBI 2016 - Proceedings
PublisherIEEE Computer Society
Pages526-530
Number of pages5
ISBN (Electronic)9781479923502
DOIs
StatePublished - Jun 15 2016
Event13th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2016 - Prague, Czech Republic
Duration: Apr 13 2016Apr 16 2016

Publication series

NameProceedings - International Symposium on Biomedical Imaging
Volume2016-June

Conference

Conference13th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2016
Country/TerritoryCzech Republic
CityPrague
Period04/13/1604/16/16

Keywords

  • Maximally Stable Extremal Regions
  • Microscopy
  • cell segmentation

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