Skip to main navigation Skip to search Skip to main content

Evaluation of effects of JPEG2000 compression on a computer-aided detection system for prostate cancer on digitized histopathology

  • Rutgers - The State University of New Jersey, New Brunswick
  • Siemens
  • University of Pennsylvania

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

13 Scopus citations

Abstract

A single digital pathology image can occupy over 10 gigabytes of hard disk space, rendering it difficult to store, analyze, and transmit. Though image compression provides a means of reducing the storage requirement, its effects on CAD (and pathologist) performance are not yet clear. In this work we assess the impact of compression on the ability of a CAD system to detect carcinoma of the prostate (CaP) in histological sections. The CAD algorithm proceeds as follows: Glands in the tissue are segmented using a region-growing algorithm. The size of each gland is then extracted and modeled using a mixture of Gamma distributions. A Markov prior (specifically, a probabilistic pairwise Markov model) is employed to encourage nearby glands to share the same class (i.e. cancerous or non-cancerous). Finally, cancerous glands are aggregated into continuous regions using a distance-hull algorithm. We evaluate CAD performance over 12 images compressed at 14 different compression ratios using JPEG2000. Algorithm performance (measured using the under the receiver operating characteristic curves) remains relatively constant for compression ratios up to 1:256. After this point performance degrades precipitously. We also have an expert pathologist view the compressed images and assign a confidence measure as to their diagnostic fidelity.

Original languageEnglish
Title of host publication2010 7th IEEE International Symposium on Biomedical Imaging
Subtitle of host publicationFrom Nano to Macro, ISBI 2010 - Proceedings
Pages1313-1316
Number of pages4
DOIs
StatePublished - 2010
Event7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Rotterdam, Netherlands
Duration: Apr 14 2010Apr 17 2010

Publication series

Name2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings

Conference

Conference7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010
Country/TerritoryNetherlands
CityRotterdam
Period04/14/1004/17/10

Fingerprint

Dive into the research topics of 'Evaluation of effects of JPEG2000 compression on a computer-aided detection system for prostate cancer on digitized histopathology'. Together they form a unique fingerprint.

Cite this