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Oncology ontology in the NCI thesaurus

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

19 Scopus citations

Abstract

The National Cancer Institute's Thesaurus (NCIT) has been created with the goal of providing a controlled vocabulary which can be used by specialists in the various sub-domains of oncology. It is intended to be used for purposes of annotation in ways designed to ensure the integration of data and information deriving from these various sub-domains, and thus to support more powerful cross-domain inferences. In order to evaluate its suitability for this purpose, we examined the NCIT's treatment of the kinds of entities which are fundamental to an ontology of colon carcinoma. We here describe the problems we uncovered concerning classification, synonymy, relations and definitions, and we draw conclusions for the work needed to establish the NCIT as a reference ontology for the cancer domain in the future.

Original languageEnglish
Title of host publicationArtificial Intelligence in Medicine - 10th Conference on Artificial Intelligence in Medicine, AIME 2005, Proceedings
PublisherSpringer Verlag
Pages213-220
Number of pages8
ISBN (Print)3540278311, 9783540278313
DOIs
StatePublished - 2005
Event10th Conference on Artificial Intelligence in Medicine, AIME 2005 - Aberdeen, United Kingdom
Duration: Jul 23 2005Jul 27 2005

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume3581 LNAI

Conference

Conference10th Conference on Artificial Intelligence in Medicine, AIME 2005
Country/TerritoryUnited Kingdom
CityAberdeen
Period07/23/0507/27/05

Keywords

  • Clinical Bioinformatics
  • NCI Thesaurus
  • Oncology
  • Ontology

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