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Placental Vessel Extraction with Shearlets, Laplacian Eigenmaps, and a Conditional Generative Adversarial Network

  • Catalina Anghel
  • , Kellie Archer
  • , Jen Mei Chang
  • , Amy Cochran
  • , Anca Radulescu
  • , Carolyn M. Salafia
  • , Rebecca Turner
  • , Karamatou Yacoubou Djima
  • , Lan Zhong
  • University of California at Davis
  • Ohio State University
  • California State University Long Beach
  • University of Wisconsin-Madison
  • Placental Analytics
  • The University of Auckland
  • Amherst College
  • University of Delaware

Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

1 Scopus citations

Abstract

The placenta is the key organ of maternal–fetal interactions, where nutrient, oxygen, and waste transfer take place. Differences in the morphology of the placental chorionic surface vascular network (PCSVN) have been associated with developmental disorders such as autism, hinting that the PCSVN could potentially serve as a biomarker for early diagnosis and treatment of autism. Studying PCSVN features in large cohorts requires a reliable and automated mechanism to extract the vascular networks. This paper presents two distinct methods for PCSVN enhancement and extraction. Our first algorithm, which builds upon a directional multiscale mathematical framework based on a combination of shearlets and Laplacian eigenmaps, is able to intensify the appearance of vessels with high success in high-contrast images such as those produced in CT scans. Our second algorithm, which applies a conditional generative adversarial neural network (cGAN), was trained to simulate a human-traced PCSVN given a digital photograph of the placental chorionic surface. This method surpasses any existing automated PCSVN extraction methods reported on digital photographs of placentas. We hypothesize that a suitable combination of the two methods could further improve PCSVN extraction results and should be studied in the future.

Original languageEnglish
Title of host publicationAssociation for Women in Mathematics Series
PublisherSpringer
Pages171-196
Number of pages26
DOIs
StatePublished - 2018

Publication series

NameAssociation for Women in Mathematics Series
Volume14

Keywords

  • Autism
  • Deep learning
  • Generative models
  • Laplacian eigenmaps
  • Neural networks
  • Placenta
  • Shearlets
  • Vascular networks
  • Wavelets
  • cGAN

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