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Thermomechanical responses of microfluidic cantilever capture DNA melting and properties of DNA premelting states using picoliters of DNA solution

  • Keren Jiang
  • , Faheem Khan
  • , Javix Thomas
  • , Parth Rakesh Desai
  • , Arindam Phani
  • , Siddhartha Das
  • , Thomas Thundat

Research output: Contribution to journalArticlepeer-review

15 Scopus citations

Abstract

Melting or thermal denaturation of a DNA molecule and the different bubble-rich, premelting DNA states that serve as a precursor for DNA thermal denaturation are vital events in DNA thermophysics. In this study, we employ cantilever-based sensing to firstly pinpoint the occurrence of DNA melting and identify the temperature Tm characterizing the melting. Very importantly, this sensing is carried out with an extremely small volume (∼picoliters) of DNA sample with the cantilever demonstrating an extremely high sensitivity on the order of mJ/gK corresponding to pico-Joules of energy input. Secondly, this same large sensitivity of the cantilever is used to quantify the hitherto unknown thermophysical properties of the bubble-rich DNA premelting states. In fact, for both the melting and premelting states, the cantilever provides a framework to calculate the specific heat capacity and the storage and loss moduli of the cantilever-DNA-solution system, thereby establishing a platform for quantifying DNAs' thermo-mechanical behavior.

Original languageEnglish
Article number173703
JournalApplied Physics Letters
Volume114
Issue number17
DOIs
StatePublished - Apr 29 2019

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